Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAAGAGCCGCGGGATCTGCC
..((((((((((((.(..(((&)))..).))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_197974
GeneSymbolBTN3A3
Binding site1211,1234
Score0.846
Seed1
Au0.426
Energy-20.2
Binding len23
Me-5.692
Phylopstem0.8983970666666666
Phylopflank0.6811352687500003
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure