Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTACAATTTGTTGCAAT
(((((((...(((((((((((&))))))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198038
GeneSymbolNUDT9
Binding site581,601
Score0.923
Seed1
Au0.618
Energy-18.4
Binding len20
Me-8.55
Phylopstem0.5989500909090909
Phylopflank0.381246779725
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end8
PositionCDS
2D Structure