Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGAGCCCCTCGCCCCTGCGGCTGCAGCTGGAC
.(.((((((((((((((.(((&.)))..)))))))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198042
GeneSymbolPDLIM2
Binding site338,373
Score0.923
Seed0
Au0.294
Energy-26.7
Binding len23
Me-5.351
Phylopstem2.8477737857142857
Phylopflank3.08500609125
Longest consecutive pairings14
Position of longest consecutive pairings3
Pairings in 3prime end7
PositionCDS
2D Structure