Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCAGGACCTGGAGCCAGG
..((((((((.(((((((....&)))))))...)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_198056
GeneSymbolSCN5A
Binding site3482,3501
Score0.923
Seed1
Au0.309
Energy-25.1
Binding len19
Me-7.782
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure