Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGCTGCCCAGCTGCAT
.((((((((.(((.((..(((&))).)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198056
GeneSymbolSCN5A
Binding site3204,3223
Score0.846
Seed1
Au0.25
Energy-22.5
Binding len19
Me-5.893
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure