Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTATTCGCACCCGGAGCAGTACAGCCAGAAGGGGGCCGAGCCGAAGGTGG
(((((((((((((((((.(...&.).)))))))))))))........)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_198057
GeneSymbolTSC22D3
Binding site172,223
Score0.846
Seed1
Au0.412
Energy-27.2
Binding len29
Me-3.938
Phylopstem-0.159606644
Phylopflank0.16106609374999997
Longest consecutive pairings13
Position of longest consecutive pairings13
Pairings in 3prime end4
Position5UTR
2D Structure