Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACTCGAGAGTAAAGGCAAGGAGGGGGGCCAGC
..(((((((((((((..((...&.))..))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_198057
GeneSymbolTSC22D3
Binding site1797,1829
Score0.923
Seed1
Au0.412
Energy-25.9
Binding len19
Me-5.19
Phylopstem0.1715856153846154
Phylopflank0.17444315000000002
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure