Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTATGACCGCTACGCTGCC
..(((((.((((((((.(((.&)))))))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198074
GeneSymbolOR2C3
Binding site1032,1052
Score0.846
Seed0
Au0.426
Energy-22.6
Binding len20
Me-7.271
Phylopstem-0.171881625
Phylopflank-0.09338337000000003
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure