Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCATACACTGCAGCCTGCAGG
((((((((((((.((((..((&)).))))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198074
GeneSymbolOR2C3
Binding site3685,3706
Score0.846
Seed1
Au0.529
Energy-21.3
Binding len21
Me-5.227
Phylopstem0.11263780000000004
Phylopflank2.06963346125
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end6
Position3UTR
2D Structure