Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGAAGTCGGCGGGCGGCTGTAGG
((((((((((.((((......&.))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198077
GeneSymbolC1orf52
Binding site152,176
Score0.923
Seed1
Au0.294
Energy-18.8
Binding len18
Me-6.995
Phylopstem-0.60314159
Phylopflank-0.28975842875000013
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure