Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCTGCAGGAGCTGCAGA
((((((((((((((((.....&)))))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198082
GeneSymbolCCDC57
Binding site989,1009
Score0.923
Seed1
Au0.338
Energy-23.1
Binding len20
Me-3.938
Phylopstem0.1030804210526316
Phylopflank-0.047697024999999976
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end3
PositionCDS
2D Structure