Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCACCCAGCTGCAGG
(((((((((.((.(((..(((&))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198082
GeneSymbolCCDC57
Binding site145,163
Score1.0
Seed1
Au0.294
Energy-21.6
Binding len18
Me-6.469
Phylopstem0.47734441111111114
Phylopflank0.14503466124999997
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure