Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGACAACCCCCTGCCAACTATATCTGAGCTGCAAT
((((((((((((((((..(((&)))..))))))....))............)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198086
GeneSymbolAJUBA
Binding site609,647
Score0.923
Seed1
Au0.441
Energy-21.3
Binding len38
Me-3.938
Phylopstem1.3324948625
Phylopflank1.1117663612500002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure