Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATATAGCCCAGTGTATGCAT
.((((((((.(((((((.(((&))).)))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198086
GeneSymbolAJUBA
Binding site1661,1684
Score1.0
Seed1
Au0.515
Energy-20.0
Binding len23
Me-5.036
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure