Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCTGGGAAGAGCTCCCCTCCACAGCTGCAGCTGA
...(((((((((((((.(((.&.)))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350620
GeneSymbolST3GAL3
Binding site2225,2263
Score1.0
Seed0
Au0.353
Energy-26.0
Binding len20
Me-6.515
Phylopstem-0.16814403076923076
Phylopflank0.24520651875
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure