Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTAGTCGCCCCTCAGAGCATGATGGGAGGTGTGCCAGA
..(((((((((...........&.))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_198098
GeneSymbolAQP1
Binding site1140,1181
Score0.923
Seed1
Au0.382
Energy-16.4
Binding len11
Me-11.418
Phylopstem0.14984933333333333
Phylopflank0.30384809000000007
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure