Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAACCCGGCTGTC
..(((((((.(((((..((((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198098
GeneSymbolAQP1
Binding site277,294
Score0.846
Seed1
Au0.324
Energy-21.3
Binding len17
Me-6.433
Phylopstem0.25066827142857145
Phylopflank0.37797159874999997
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure