Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACAGCTGTATGCCAA
...(((((((((.(((((....&)))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_198123
GeneSymbolCSMD3
Binding site8093,8110
Score1.0
Seed0
Au0.588
Energy-20.2
Binding len17
Me-7.804
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure