Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAATGCATACCCCACAGCTGTAAA
(((((((((.(((((((((((&))))...)))).)))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198123
GeneSymbolCSMD3
Binding site10293,10321
Score0.923
Seed1
Au0.515
Energy-21.5
Binding len28
Me-5.18
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure