Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACAGCTGTATGCCAA
...(((((((((.(((((....&)))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_198124
GeneSymbolCSMD3
Binding site8058,8075
Score0.923
Seed0
Au0.588
Energy-20.2
Binding len17
Me-7.804
Phylopstem5.7401277777777775
Phylopflank4.407393245
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure