Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTCAACGGATAGCTGA
...(((((((.((((..((((&))))..)))).).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198124
GeneSymbolCSMD3
Binding site1622,1642
Score0.923
Seed0
Au0.485
Energy-20.2
Binding len20
Me-9.572
Phylopstem6.4222275
Phylopflank3.6481332487499993
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure