Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTCAGTGGGCCCCAGAACCAAGAAGAGAAAGGCAAGGCCAGTGG
(((((((((((((((((((...&.)))).............)))))))...)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_198137
GeneSymbolCATSPER4
Binding site1779,1825
Score0.923
Seed1
Au0.471
Energy-26.5
Binding len37
Me-3.938
Phylopstem2.4948638742857137
Phylopflank2.6102051349999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure