Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATTCAAGAAGTGCCTGGAAGAGAGGGTGCATTGTGAGGCAGGTC
(((((.(.(((((((((..(((&.)))..))))))))).).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_198148
GeneSymbolCPXM2
Binding site2515,2560
Score0.923
Seed0
Au0.412
Energy-19.7
Binding len24
Me-8.152
Phylopstem2.6531652222222224
Phylopflank2.2754347350000006
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure