Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCAATGGCGGCTGTGAG
((((((((((.(((((..(((&)))))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198155
GeneSymbolGATD3
Binding site9,29
Score0.923
Seed1
Au0.293
Energy-24.2
Binding len20
Me-6.762
Phylopstem-0.246789187
Phylopflank0.4404455941250002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure