Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGCACAGACCCTGGAGCTGCT
..((((((.(((((((..(((&)))..))))...))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330530
GeneSymbolEIPR1
Binding site564,587
Score0.846
Seed1
Au0.456
Energy-18.7
Binding len23
Me-6.013
Phylopstem4.6265969
Phylopflank4.752655870625
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure