Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAATTTGAGGCTGGTTTTATTTGTACAACTGCAGGCTGGGGC
((.((((((((((((((....&.))))))))))).))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198185
GeneSymbolOVCH2
Binding site586,629
Score0.897
Seed0
Au0.485
Energy-21.7
Binding len20
Me-5.495
Phylopstem0.5948571800000001
Phylopflank-0.20713097874999992
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end4
PositionCDS
2D Structure