Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTAGCAACCTCACAGCTGTG
..(((((((.((((((..(((&)))...))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350656
GeneSymbolCEP57L1
Binding site4378,4401
Score0.923
Seed1
Au0.544
Energy-20.4
Binding len23
Me-6.2
Phylopstem0.2432785571428572
Phylopflank0.5849945175
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure