Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCACACAAACCTGATTGGGCAGCCCATCAGCAGTTGTGAA
((((((((((((((((.((((&.))))......)))))).....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198189
GeneSymbolCOPS8
Binding site3419,3461
Score0.923
Seed1
Au0.529
Energy-20.4
Binding len33
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure