Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCAGCCCTTCAGCTCCGAT
(((.(((((.((((((.(((.&)))))))))...))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198194
GeneSymbolSTOM
Binding site300,322
Score0.923
Seed0
Au0.456
Energy-19.1
Binding len22
Me-8.212
Phylopstem-0.04970083333333323
Phylopflank-0.31796542000000005
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end6
PositionCDS
2D Structure