Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCAGTAGCTTCCACAAATGCAGTCATTGCAGCTGTG
..(((((((((((((((....&.))))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198195
GeneSymbolUBA3
Binding site900,939
Score0.846
Seed1
Au0.529
Energy-18.9
Binding len20
Me-4.957
Phylopstem-0.43516933333333335
Phylopflank-0.3484758912499999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure