Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAAGGCTGAAGTTGCTGCAGA
(((((((..(((((...((((&))))..))))).....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198195
GeneSymbolUBA3
Binding site335,359
Score0.808
Seed1
Au0.632
Energy-18.1
Binding len24
Me-8.276
Phylopstem0.29842174285714285
Phylopflank-0.03311824374999998
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure