Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCCCTCTTGGGAGCCGCAGCAGCAGA
((((.(((((((((.(((((.&.)))))..))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198215
GeneSymbolFAM13C
Binding site265,294
Score0.923
Seed0
Au0.338
Energy-24.4
Binding len23
Me-8.792
Phylopstem-0.19942902222222225
Phylopflank0.14490236375000004
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure