Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTTGTTGAATTTGAAAATGATGGGCAGGCTGGAGCTGCC
..((((((.(((((((.....&.)))).))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198220
GeneSymbolSNRPB2
Binding site641,683
Score0.846
Seed1
Au0.559
Energy-19.2
Binding len17
Me-6.013
Phylopstem2.729819
Phylopflank3.738311345
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure