Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CATCCGCGGCTGCAT
.(((((((((((.((......&)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198229
GeneSymbolRGS12
Binding site1001,1016
Score1.0
Seed1
Au0.338
Energy-23.8
Binding len15
Me-5.316
Phylopstem1.621316109090909
Phylopflank2.51002371375
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure