Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGACAGCCTCCCTGCAGGGCAGACAGAGCCTCAGCCTCAGCTGCAGG
(((((((((.(((((..((((&.))))))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198236
GeneSymbolARHGEF11
Binding site5686,5736
Score0.846
Seed1
Au0.353
Energy-27.0
Binding len21
Me-5.413
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure