Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATTGTGTGTGCAGA
..((((((((((((((......&))))))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_198240
GeneSymbolCLIP1
Binding site4497,4513
Score0.846
Seed1
Au0.588
Energy-17.4
Binding len16
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end2
Position3UTR
2D Structure