Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCCAACCTGCTGCGGA
(((((((...(((((..((((&))))..))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198241
GeneSymbolEIF4G1
Binding site4770,4790
Score0.923
Seed1
Au0.485
Energy-21.3
Binding len20
Me-8.783
Phylopstem5.465677142857143
Phylopflank5.10812637875
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure