Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCCAACCTGCTGCGGA
(((((((...(((((..((((&))))..))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198242
GeneSymbolEIF4G1
Binding site4355,4375
Score0.923
Seed1
Au0.485
Energy-21.3
Binding len20
Me-8.783
Phylopstem7.096626857142858
Phylopflank4.0645757375
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure