Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTTCCTTTGTATGCCAGC
..(((((((((((.........&.))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_198269
GeneSymbolHIPK1
Binding site3804,3822
Score0.892
Seed1
Au0.647
Energy-17.5
Binding len13
Me-6.782
Phylopstem5.326550881818182
Phylopflank4.518109192499999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure