Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCGACTTCTGCTGCTGCAC
.((((((.((((..((..(((&)))...))..)))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198269
GeneSymbolHIPK1
Binding site2417,2439
Score0.923
Seed1
Au0.471
Energy-21.0
Binding len22
Me-8.253
Phylopstem6.8779916666666665
Phylopflank5.6792146937500005
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure