Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACTGCAGCAGCTGCT
..((((((((.((.(((....&))).)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198269
GeneSymbolHIPK1
Binding site850,866
Score1.0
Seed1
Au0.515
Energy-20.4
Binding len16
Me-8.639
Phylopstem7.092294237499999
Phylopflank6.125188972500002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure