Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCCTGCAGCCAGCAGCAGCC
..((.(((((((((((.(((.&.))))))))).))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198270
GeneSymbolNHS
Binding site5313,5335
Score0.923
Seed0
Au0.353
Energy-23.1
Binding len20
Me-9.076
Phylopstem1.473340675
Phylopflank1.3999624075000001
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure