Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCATGTGTGCA
.....((((((.((((((((..&)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_198273
GeneSymbolLYSMD3
Binding site3466,3481
Score0.923
Seed0
Au0.588
Energy-17.9
Binding len15
Me-17.012
Phylopstem5.141070375
Phylopflank4.23826311875
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure