Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGATGCAGCAGAGAGGAGCAGCTGGAAGCCGTGGCTGCGC
.(((((((((((((....(((&.)))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198275
GeneSymbolMPZL3
Binding site65,109
Score1.0
Seed1
Au0.368
Energy-23.9
Binding len21
Me-4.762
Phylopstem0.2889622153846154
Phylopflank0.32538740749999995
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure