Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGGCATGGAGCTGCCGGATCCGGTGCGCCAGCGGCTGGGAA
((.(((((((((.((((.((.&.))..)))))).))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198276
GeneSymbolTMEM17
Binding site58,103
Score0.846
Seed0
Au0.338
Energy-21.0
Binding len23
Me-6.784
Phylopstem-0.24624266999999994
Phylopflank0.39148956124999995
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end6
Position5UTR
2D Structure