Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTATGACCAGGCAGCTTGGATCTTAAAAGCAAG
((((((((((((((((((((.&))))))))))..))))))............)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198310
GeneSymbolTTC8
Binding site298,333
Score1.0
Seed1
Au0.559
Energy-23.4
Binding len35
Me-3.938
Phylopstem4.534615385294119
Phylopflank4.03296942125
Longest consecutive pairings10
Position of longest consecutive pairings25
Pairings in 3prime end7
PositionCDS
2D Structure