Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCGGCCGACCCCGCTC
....(((.(((((((((((((&)))))))))))).)...))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198389
GeneSymbolPDPN
Binding site5,26
Score0.923
Seed0
Au0.327
Energy-20.4
Binding len21
Me-11.86
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end8
Position5UTR
2D Structure