Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGCTGCAGCGGCAGCTGG
...(((((((.((((((..((&))..)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198396
GeneSymbolCACNA1G
Binding site3292,3311
Score0.846
Seed0
Au0.353
Energy-24.3
Binding len19
Me-9.339
Phylopstem1.1228852857142857
Phylopflank0.08750336750000004
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure