Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGCGAAGAGCCGGG
..(((((((.((.((((((...&)))))).)).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_198407
GeneSymbolGHSR
Binding site57,75
Score0.846
Seed1
Au0.338
Energy-24.6
Binding len18
Me-7.489
Phylopstem-0.5064391428571429
Phylopflank0.32939668675
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure