Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTTGCATTCTGCTGCGGGTGCT
..(((.(((((((((((((((&))))))))....))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198407
GeneSymbolGHSR
Binding site1368,1392
Score0.846
Seed0
Au0.544
Energy-20.8
Binding len24
Me-6.858
Phylopstem0.3886172147368421
Phylopflank0.04853010850000003
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end8
Position3UTR
2D Structure